There are four Houses in the school – Indus, Zangskar, Suru and Shayok. Every student of the school, on admission, is placed in one of these houses. House system is introduced to encourage greater participation of the students in the school activities in an organized manner. Each House is supervised by a House Teacher Incharge assisted by other teachers assigned to the House.

To encourage leadership qualities among the students, House appointments are made. Each House has a boy and a girl as House Captains. Depending upon the need, other appointments can be made. Points are awarded to the Houses throughout the year for extra-curricular activities, games and sports. At the end of the year Houses gaining the highest number of points are awarded running trophies. Inter-House competitions are organized in games & sports, dramatics, debates, quiz, art and music.

Appointment of students is done at 3 levels to foster leadership qualities among students.